PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG018220.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 476aa MW: 49459.3 Da PI: 8.031 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.3 | 1.8e-29 | 226 | 285 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+ TRIDC3BG018220.3 226 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 285 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
GLQIASALPM VLESFPSTQR NSITTSKEES LDDKLEATKA EMGEVREENE RLKTLLSHIV 60 RDYQSLQTHF QDAVKVKHQA PAADKLPAAS APAPTADDLV SLSLGSGGYA RPKGAHQRSL 120 SSSSSGTETD PDDQLSLGLS SRRSTDGDNR QVARPSATPL MNLSSDSSAD DSAAPGSDLP 180 AAACPPATKA RKSPSAVVDG ADDEVLQQQA KKARVSVRVK CDTPTMNDGC QWRKYGQKIS 240 KGNPCPRAYY RCTVAPSCPV RKQVQRCADD MSILITTYEG THSHPLPPAA AAMASTTSAA 300 ASMLLAGSSS SSSHGHHLPF ASAGLLGPTT ISTIASCPTV TLDLTAPHSL MQQQYQSPYA 360 AGYESKALPA AWSSGYLAPY AGGLPFYGKS SLPAMGQHFG LGMATTRAEQ LYGAAHSSSY 420 LQRTSSGGGV HGAPAAAPAV TDTIAKAITL DPSFQSVLAA AITSYMGRGA GAAAHK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 211 | 220 | KKARVSVRVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 6e-50 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG018220.3 |