PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018220.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 476aa MW: 49459.3 Da PI: 8.031

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018220.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.8e-29	226	285	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+ TRIDC3BG018220.3 226 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 285 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
GLQIASALPM VLESFPSTQR NSITTSKEES LDDKLEATKA EMGEVREENE RLKTLLSHIV 60 RDYQSLQTHF QDAVKVKHQA PAADKLPAAS APAPTADDLV SLSLGSGGYA RPKGAHQRSL 120 SSSSSGTETD PDDQLSLGLS SRRSTDGDNR QVARPSATPL MNLSSDSSAD DSAAPGSDLP 180 AAACPPATKA RKSPSAVVDG ADDEVLQQQA KKARVSVRVK CDTPTMNDGC QWRKYGQKIS 240 KGNPCPRAYY RCTVAPSCPV RKQVQRCADD MSILITTYEG THSHPLPPAA AAMASTTSAA 300 ASMLLAGSSS SSSHGHHLPF ASAGLLGPTT ISTIASCPTV TLDLTAPHSL MQQQYQSPYA 360 AGYESKALPA AWSSGYLAPY AGGLPFYGKS SLPAMGQHFG LGMATTRAEQ LYGAAHSSSY 420 LQRTSSGGGV HGAPAAAPAV TDTIAKAITL DPSFQSVLAA AITSYMGRGA GAAAHK

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

GLQIASALPM VLESFPSTQR NSITTSKEES LDDKLEATKA EMGEVREENE RLKTLLSHIV  60
RDYQSLQTHF QDAVKVKHQA PAADKLPAAS APAPTADDLV SLSLGSGGYA RPKGAHQRSL  120
SSSSSGTETD PDDQLSLGLS SRRSTDGDNR QVARPSATPL MNLSSDSSAD DSAAPGSDLP  180
AAACPPATKA RKSPSAVVDG ADDEVLQQQA KKARVSVRVK CDTPTMNDGC QWRKYGQKIS  240
KGNPCPRAYY RCTVAPSCPV RKQVQRCADD MSILITTYEG THSHPLPPAA AAMASTTSAA  300
ASMLLAGSSS SSSHGHHLPF ASAGLLGPTT ISTIASCPTV TLDLTAPHSL MQQQYQSPYA  360
AGYESKALPA AWSSGYLAPY AGGLPFYGKS SLPAMGQHFG LGMATTRAEQ LYGAAHSSSY  420
LQRTSSGGGV HGAPAAAPAV TDTIAKAITL DPSFQSVLAA AITSYMGRGA GAAAHK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	220	KKARVSVRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-50	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018220.3