PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG018210.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 114aa MW: 12813.2 Da PI: 10.0235 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.5 | 6.6e-29 | 20 | 78 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K vk+s++ r+YYrC+ +gC vkk++er+++dp++v +tY g Hnh TRIDC3BG018210.2 20 MDDGFRWRKYGKKAVKSSPNLRNYYRCSAEGCGVKKRIERDRDDPRYVLTTYDGVHNHV 78 69********************************************************5 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 114 aa Download sequence |
MTGRPSGRIG FRTRSEVEVM DDGFRWRKYG KKAVKSSPNL RNYYRCSAEG CGVKKRIERD 60 RDDPRYVLTT YDGVHNHVTP GSTSSRAAPA YSAPTAPAWT WSELHAAAHS SESY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G26170.1 | 4e-38 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG018210.2 |