PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG017660.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 496aa MW: 55347.1 Da PI: 7.8683

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.8	1.8e-35	101	243	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+Ptd+el+ e+L++kv+++ ++ e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ TRIDC3BG017660.1 101 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIN--EFIPTIDgedgICYTHPEKLP-GVTMDGLSKHFFHRPSKAYTTGTRKRRKiqtecd 189 799**********.99**99966754422..23444433445******.455567899**************7566666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3BG017660.1 190 vhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 243 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
TPSNSTRLPS VRSPASVSRR IFDLIGMVPR VLNSARLGPL QRAHAWTPSP AAACEPGDMN 60 RGHISSSELI DAKLEEHRIS TARHCPNCRH KLDCKPDWLG LPAGVKFDPT DQELIEHLEA 120 KVREEGSRSH PLINEFIPTI DGEDGICYTH PEKLPGVTMD GLSKHFFHRP SKAYTTGTRK 180 RRKIQTECDV HKGETRWHKT GKTRPVMANG RQKGCKKILV LYTNFGKHRK PEKTNWVMHQ 240 YHLGDLEEEK EGELVVCKIF YQTQPRQCSW SASSDRGGAG GAVAIAASAA VTVQEQRMRD 300 SGSGSSSSRD HEALSATSYP AGYAMAAAVE MQHLKHSGDH FSFTPFRKSF EEVGIGVDQV 360 PSDQLGRSEH QQHAGQEQQP HRPELATTAV PATAFLVSRP TNPISATVPP PLQHTSVVLD 420 HDQFHVPAIF LHHEKFQNMQ QQHQHQQKID RRSAGLEELV MGCTSTCTKG ETSIPHSQET 480 EWPYPYWPPD NQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

TPSNSTRLPS VRSPASVSRR IFDLIGMVPR VLNSARLGPL QRAHAWTPSP AAACEPGDMN  60
RGHISSSELI DAKLEEHRIS TARHCPNCRH KLDCKPDWLG LPAGVKFDPT DQELIEHLEA  120
KVREEGSRSH PLINEFIPTI DGEDGICYTH PEKLPGVTMD GLSKHFFHRP SKAYTTGTRK  180
RRKIQTECDV HKGETRWHKT GKTRPVMANG RQKGCKKILV LYTNFGKHRK PEKTNWVMHQ  240
YHLGDLEEEK EGELVVCKIF YQTQPRQCSW SASSDRGGAG GAVAIAASAA VTVQEQRMRD  300
SGSGSSSSRD HEALSATSYP AGYAMAAAVE MQHLKHSGDH FSFTPFRKSF EEVGIGVDQV  360
PSDQLGRSEH QQHAGQEQQP HRPELATTAV PATAFLVSRP TNPISATVPP PLQHTSVVLD  420
HDQFHVPAIF LHHEKFQNMQ QQHQHQQKID RRSAGLEELV MGCTSTCTKG ETSIPHSQET  480
EWPYPYWPPD NQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-111	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017660.1