PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017610.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 54aa    MW: 6394.47 Da    PI: 11.1431
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017610.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.93.7e-0810471252
                      HHHHHHHHH.HHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
               HLH 12 RRdriNsaf.eeLrellPkaskapskKlsKaeiLekAveYIk 52
                      RR ri +++  +L+ l+P+     +k  + +++L+ Av+YIk
  TRIDC3BG017610.3 10 RRTRISKRLlRRLQHLVPNM----DKQTNTSDMLRIAVDYIK 47
                      89999999889********7....688**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 54 aa     Download sequence    
MKERHFCEER RTRISKRLLR RLQHLVPNMD KQTNTSDMLR IAVDYIKVGA AGPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-09bHLH family protein