PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016300.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 159aa    MW: 18044 Da    PI: 9.1109
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016300.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.8e-212282257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      r+R+t+t+ ql++Le +F++ n +ps++++++++++l    +++e++V++WFqNrRa+ k+
  TRIDC3BG016300.7 22 RQRWTPTQMQLQILEIVFNQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 82
                      89*****************99**************************************97 PP
2Wus_type_Homeobox1018.5e-332184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPt+ Q++iLe ++++G  tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq
   TRIDC3BG016300.7 21 ARQRWTPTQMQLQILEIVFNQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 84
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSLGNLYCDP LMVHGGQKIT ARQRWTPTQM QLQILEIVFN QGNGTPSKQK IKDITAELSQ  60
HGQISETNVY NWFQNRRARS KRKQAASSLP NNAESEAEGD EESLTDKKPR SDGSQQQNMA  120
VRAHNPERIS EMHRHFDAAE REQVRGPMMY GSSNDTSRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.18e-36WOX family protein