PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG016300.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 158aa    MW: 17811.7 Da    PI: 9.5908
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG016300.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.32e-212282257
                       T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
           Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       r+R+t+t+ ql++Le+ F++ n +ps++++++++++l    +++e+++++WFqNrRa+ k+
  TRIDC3BG016300.10 22 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 82
                       89*****************99**************************************97 PP
2Wus_type_Homeobox102.43.2e-332184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPt+ Q++iLe+++++G  tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq
  TRIDC3BG016300.10 21 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 84
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MSLGNLYCDP LMVHGGQKIT ARQRWTPTQM QLQILESIFN QGNGTPSKQK IKDITAELSQ  60
HGQISETNIY NWFQNRRARS KRKQAASSLP NNAESEAEGD EESPTDKKPR SDGSQQQNMA  120
VRAHNLKRIS EMHRHFDAAE RGHVCGPTMY GSSNDTSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-36WOX family protein