PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG015320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 154aa MW: 17186.4 Da PI: 10.6139 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.7e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ ++++G tW+++a+ g++R++k+c++rw +yl TRIDC3BG015320.1 16 KGLWSPEEDERLYTRITRHGVSTWSSVAQLAGLRRSGKSCRLRWMNYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.8 | 3e-14 | 71 | 112 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + ++ E+e ++ + k lG++ W+ Ia++m+ gRt++++k++w++ TRIDC3BG015320.1 71 PISKREEETIISLQKSLGNR-WSVIAAKMP-GRTDNEIKNYWNS 112 56889***************.*********.***********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
SQADVGGEVE AHKERKGLWS PEEDERLYTR ITRHGVSTWS SVAQLAGLRR SGKSCRLRWM 60 NYLRPDLKKE PISKREEETI ISLQKSLGNR WSVIAAKMPG RTDNEIKNYW NSRIRKRQNA 120 SPAGGKGDSG CAKQQGDLPA ADDKASVLAG PRAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 2e-48 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG015320.1 |