PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG015160.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 257aa MW: 26502.3 Da PI: 7.719 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 143.9 | 4.7e-45 | 27 | 126 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC ++Cv+apyfp e+p+kfanvhk+FGasnv+kll++lp+++reda+ssl+yeAear++dPvyG+vg i+ lq+q+++l++e TRIDC3BG015160.3 27 PCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVTKLLNELPPHQREDAVSSLAYEAEARVKDPVYGCVGAISVLQRQVHRLQKE 119 7******************************************************************************************** PP DUF260 94 lallkee 100 l+++++e TRIDC3BG015160.3 120 LDAAHTE 126 **99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MASPSSTGNS AVSVVVAAPT TPGAGAPCAA CKFLRRKCLP GCVFAPYFPP EEPQKFANVH 60 KVFGASNVTK LLNELPPHQR EDAVSSLAYE AEARVKDPVY GCVGAISVLQ RQVHRLQKEL 120 DAAHTELLRY ACGELGGIPT ALPVVTASIP IGRLSSAAMP CPGQLAGGMY SGGSGGGFRR 180 LGLVDAIVPQ PPLSAGCFYN MRSSNNAGGS VAAEVAPVQI PYASMANWAV NAISTITTTS 240 GSESIVMDHK EGGDSSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 3e-62 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG015160.3 |