PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG014740.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 274aa MW: 31375.7 Da PI: 10.8018 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 52.1 | 8.2e-17 | 74 | 125 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS..EEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg..klyeys 50 kri n+ r tf kRr g+lKKA EL vLC+++ +++f +g kl++y+ TRIDC3BG014740.2 74 KRIHNDVSRRATFGKRRRGLLKKARELAVLCGVDLGLLVFDDDGagKLFDYC 125 79**************************************998533788887 PP | |||||||
2 | K-box | 31 | 1.1e-11 | 157 | 234 | 14 | 90 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLes.LslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 ++ l +a L++e + L+ + R+ GedL s + eL Leq+Le+ l ++R+ K++ l +q++e+ +k + e TRIDC3BG014740.2 157 QQPLADIIAGLRREHDRLEVSVRRQTGEDLPSaATAAELDDLEQRLERVLGEVREMKDKPLEQQLDESYHKVIVILGE 234 46666678899*******************7725789******************************99998766555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
RLYGGAWRRT ITRGEERRAH PSSQFQSQLL QPLPGRTKKK KNRIRATQAS SSSASIAPRV 60 PSQEKMGRGR TEMKRIHNDV SRRATFGKRR RGLLKKAREL AVLCGVDLGL LVFDDDGAGK 120 LFDYCSPNTS WSELIERYES ITNHKFQFQG INHVDDQQPL ADIIAGLRRE HDRLEVSVRR 180 QTGEDLPSAA TAAELDDLEQ RLERVLGEVR EMKDKPLEQQ LDESYHKVIV ILGEPKSIQR 240 HTKQFFIRNL TVNGLVHLTR RCTPWRTRTA SFAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 2e-13 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG014740.2 |