PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG011620.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 237aa    MW: 26397 Da    PI: 5.7781
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG011620.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP81.28.7e-2657122171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r e+sL+ lt+kf++ll+++e+gi++ln+va+ L    v  k+RRiYDi+NVLe+++l+ekk kn+irw+g
  TRIDC3BG011620.5  57 RAEHSLGELTKKFISLLKQAEDGILDLNNVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 122
                       6799******************************...88..9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
ITSPGFTEGV SSPHMTPISG KAARTYKSKA KGSKDGLQTP ISNAGSPGTP LTPGSSRAEH  60
SLGELTKKFI SLLKQAEDGI LDLNNVAEIL VVKKRRIYDI TNVLEGIGLL EKKLKNRIRW  120
RGLDDSGANL DNEISVLETE LENLKLQEKA LDNRISEMHE KVRELTEEEN NQRWLYLTED  180
DIKGLPCFQN ETLIAIKAPH GTTLEVPDPD EAGDYIQRRY TIVIRSTMGS IDLYLVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.17e-90E2F/DP family protein