PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG011620.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 150aa    MW: 16227.8 Da    PI: 10.5549
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG011620.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP82.63.3e-2683148171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r e+sL+ lt+kf++ll+++e+gi++ln+va+ L    v  k+RRiYDi+NVLe+++l+ekk kn+irw+g
  TRIDC3BG011620.4  83 RAEHSLGELTKKFISLLKQAEDGILDLNNVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 148
                       6799******************************...88..9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
GIVIRTPLKR KAPCGESDAI ESTEWMITSP GFTEGVSSPH MTPISGKAAR TYKSKAKGSK  60
DGLQTPISNA GSPGTPLTPG SSRAEHSLGE LTKKFISLLK QAEDGILDLN NVAEILVVKK  120
RRIYDITNVL EGIGLLEKKL KNRIRWRGFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.36e-32E2F/DP family protein