PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG011620.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 390aa MW: 42819.2 Da PI: 4.9648

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG011620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	80.1	2e-25	112	177	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r e+sL+ lt+kf++ll+++e+gi++ln+va+ L v k+RRiYDi+NVLe+++l+ekk kn+irw+g TRIDC3BG011620.1 112 RAEHSLGELTKKFISLLKQAEDGILDLNNVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 177 6799****************************...88..9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
AEYHRFPLPP SSSAPAAASR GSAGGDVEEG IVIRTPLKRK APCGESDAIE STEWMITSPG 60 FTEGVSSPHM TPISGKAART YKSKAKGSKD GLQTPISNAG SPGTPLTPGS SRAEHSLGEL 120 TKKFISLLKQ AEDGILDLNN VAEILVVKKR RIYDITNVLE GIGLLEKKLK NRIRWRGLDD 180 SGANLDNEIS VLETELENLK LQEKALDNRI SEMHEKVREL TEEENNQRWL YLTEDDIKGL 240 PCFQNETLIA IKAPHGTTLE VPDPDEAGDY IQRRYTIVIR STMGSIDLYL VSKFEENMEE 300 LVGVATPPRH ANVAEPASTD GFIATEAGQS SRSKDKLPNI QHIHRTPDLN AQVGGMAKIT 360 PEFDVDADYY LLTDGDASSI TDMWRTARIL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

AEYHRFPLPP SSSAPAAASR GSAGGDVEEG IVIRTPLKRK APCGESDAIE STEWMITSPG  60
FTEGVSSPHM TPISGKAART YKSKAKGSKD GLQTPISNAG SPGTPLTPGS SRAEHSLGEL  120
TKKFISLLKQ AEDGILDLNN VAEILVVKKR RIYDITNVLE GIGLLEKKLK NRIRWRGLDD  180
SGANLDNEIS VLETELENLK LQEKALDNRI SEMHEKVREL TEEENNQRWL YLTEDDIKGL  240
PCFQNETLIA IKAPHGTTLE VPDPDEAGDY IQRRYTIVIR STMGSIDLYL VSKFEENMEE  300
LVGVATPPRH ANVAEPASTD GFIATEAGQS SRSKDKLPNI QHIHRTPDLN AQVGGMAKIT  360
PEFDVDADYY LLTDGDASSI TDMWRTARIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-105	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG011620.1