PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG010910.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 593aa    MW: 67672.7 Da    PI: 8.1962
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG010910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.22e-1082135841374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cAeavs ++ +la+ +L+ +++++sp+gd +qRla+y++  L+ rl++s+s++ +++ +++t+    ++ l+  +l + v+P+l+ 
  TRIDC3BG010910.1 213 LRSLLIHCAEAVSVNNRSLASDILKSIRQHCSPSGDDTQRLAFYLADCLEIRLSGSGSQINQKVITTPTN---AAHILKLCHLCFTVCPYLRS 302
                       689**********************************************************999998887...8999999999********** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+ + N++Il+  +g+ rvHiiDf+i +G+QWp+Ll+++++R++gpp+lRiTg++ p++g    e+ ++t+ rL+++A+ ++vp+e++  +++
  TRIDC3BG010910.1 303 SYYLSNKTILDVSKGKPRVHIIDFGIFYGFQWPSLLKQFSDREGGPPKLRITGIELPTPGfrPDEMNKNTRLRLTEYADIFQVPLEYQQ-ISS 394
                       ***********************************************************9*88899999********************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e++++eeL+++++E+l+Vn++l+++++ de+ +++ +r++vL++++ ++P+++++   + ++n++ Fl rf e +++y+++fd+l+++ pr
  TRIDC3BG010910.1 395 KWESISIEELNIDKDEVLVVNCILRMKNIGDETITIDCARNRVLNTIRMMKPTIFIHGVVNGSYNTPFFLSRFKEVMYHYTSMFDMLDKTTPR 487
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r+ +Er + + +i n++aceg+er+er e+++kW++r  +a F+++pl+ +++k +++++r+++ + + v+ee+++lvlgWk+r L+++
  TRIDC3BG010910.1 488 DNETRMILERDIYKYAILNAIACEGSERIERPESYKKWNARSVRARFEQLPLNPTIVKGIQSMVRQIYHKDFFVDEEDQCLVLGWKGRILYAL 580
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC3BG010910.1 581 STWK 584
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MEEPFYELLG QKYPVLPGLL PLCGCDRLKN LNGSVCRLNN GQLCNNCSVK ISSDNYHSNG  60
SSQASQAPWS LSAIVGEAIQ FPLGVEKMGI GLNINGLSIS PESHSPHMND KDTIKHAPFH  120
GRSRKVFPGI EELDLLEGRR NKQIAIFSDE PVRNEVFDKV LLCSENKPVD EDIILQRGMA  180
DISTKYAQKE QGRKPARRMK RGKTRKKKEV VDLRSLLIHC AEAVSVNNRS LASDILKSIR  240
QHCSPSGDDT QRLAFYLADC LEIRLSGSGS QINQKVITTP TNAAHILKLC HLCFTVCPYL  300
RSSYYLSNKT ILDVSKGKPR VHIIDFGIFY GFQWPSLLKQ FSDREGGPPK LRITGIELPT  360
PGFRPDEMNK NTRLRLTEYA DIFQVPLEYQ QISSKWESIS IEELNIDKDE VLVVNCILRM  420
KNIGDETITI DCARNRVLNT IRMMKPTIFI HGVVNGSYNT PFFLSRFKEV MYHYTSMFDM  480
LDKTTPRDNE TRMILERDIY KYAILNAIAC EGSERIERPE SYKKWNARSV RARFEQLPLN  540
PTIVKGIQSM VRQIYHKDFF VDEEDQCLVL GWKGRILYAL STWKPSECED EDD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193208RKPARRMKRGKTRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-137GRAS family protein