PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG008980.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 297aa    MW: 32110.8 Da    PI: 9.6363
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG008980.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.6e-15152196347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E++l++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
  TRIDC3BG008980.2 152 PWTEDEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKY 196
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MMMREPWMEV LPPAAMGYYG GPRGAGGWFT GQPRAWTADE NKQFERALAG LDLRSPDWDK  60
VAHATGKTVR EVVDHFKSLE LDVRQIESGT FPGYGPGAAG AGAAAAFTLQ WDGSGGHAGA  120
GDFRHGYRFG GCGGGRRHGG RTPEQERKKG VPWTEDEHKL FLLGLKKYGK GDWRNISRNF  180
VQTRTPTQVA SHAQKYFIRL SSGGGKDKRR SSIHDITTVH LDDQPPSPSQ SSMITQSSAP  240
APSSATGQFS LPADTKQHGG ANAPYNSPPS YGMGLQDQGI QCGPLHDQLA ANRSMLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-36MYB family protein