PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG003910.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 734aa MW: 85919.5 Da PI: 8.4965

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG003910.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.9	4.6e-25	32	126	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrks+ + n+ i+ r+ vCs++g+re+++ k ++++rr+r+ tr+gC+akl++++++ +g+w v+++ eH+H+l TRIDC3BG003910.7 32 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 124 6****************************************999888889999***************99**************9 PP FAR1 90 ap 91 ap TRIDC3BG003910.7 125 AP 126 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MQEDMAYAND ESMFEYVNVV SKMFDSEAEG YEFYNKYALE KGFSVRKSYV EWDGSNKYII 60 LRKIVCSRQG FREDKHMKRK MEDRKRRPRS LTRVGCNAKL VITRQEETGR WFVKDFIDEH 120 SHPLAPRDLS CLLRSYRRIS DEQKADIADM EKCGIRKYRI MDILCFQYGG FDKVGCIKRD 180 VYNFCHANKQ ETISAGDAKT VIMHMMARRE RDVDFFFKYL VDEHGHLKGL FWADSQSRLD 240 YEAFGDVIVF DSTYRTNKYN LPFVPFVGLN HHRSTVIFGC GIISHETSQA YEWMLRTFSD 300 CMAQKHPISV ITDGDLAMQR AIRVVWPDSN HRLCIWHIQQ NIVRHLHDDD VKEEFRYFIY 360 DTSSIEEHEI KWIQFLQRNK VTSEESWLHQ MYQMRKLWCA PYLEGRCFLG LSSNQRSESL 420 NSVLHTHLEG KMSLFEMLEH YEHCLASRRI NEALHDVEAL QSVPFTEENA LPLEKHAATV 480 FTPRVFKMVL WSIDAVSKCQ IREILDGLED STYVVSKQER MDKKFGVRIE EQGGLLHRVS 540 CSCRKLECAG TPCSHIFYIL GILKQTILPG CCVPTRWTMN AKCAYAPTRK NQMYDYSLSL 600 QRYRELRNCS HAASFQACHS DEDYHCLKML LQAQHHGKQS SFELADSKES TNAQHNSIRF 660 GPLMPHSQKV DKVLDPVHVP GRGAPKKRLQ SKTKKSRSQN ICGYCKKPGH NRRKCAKLLE 720 VRNMFIFFLH VFCS

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MQEDMAYAND ESMFEYVNVV SKMFDSEAEG YEFYNKYALE KGFSVRKSYV EWDGSNKYII  60
LRKIVCSRQG FREDKHMKRK MEDRKRRPRS LTRVGCNAKL VITRQEETGR WFVKDFIDEH  120
SHPLAPRDLS CLLRSYRRIS DEQKADIADM EKCGIRKYRI MDILCFQYGG FDKVGCIKRD  180
VYNFCHANKQ ETISAGDAKT VIMHMMARRE RDVDFFFKYL VDEHGHLKGL FWADSQSRLD  240
YEAFGDVIVF DSTYRTNKYN LPFVPFVGLN HHRSTVIFGC GIISHETSQA YEWMLRTFSD  300
CMAQKHPISV ITDGDLAMQR AIRVVWPDSN HRLCIWHIQQ NIVRHLHDDD VKEEFRYFIY  360
DTSSIEEHEI KWIQFLQRNK VTSEESWLHQ MYQMRKLWCA PYLEGRCFLG LSSNQRSESL  420
NSVLHTHLEG KMSLFEMLEH YEHCLASRRI NEALHDVEAL QSVPFTEENA LPLEKHAATV  480
FTPRVFKMVL WSIDAVSKCQ IREILDGLED STYVVSKQER MDKKFGVRIE EQGGLLHRVS  540
CSCRKLECAG TPCSHIFYIL GILKQTILPG CCVPTRWTMN AKCAYAPTRK NQMYDYSLSL  600
QRYRELRNCS HAASFQACHS DEDYHCLKML LQAQHHGKQS SFELADSKES TNAQHNSIRF  660
GPLMPHSQKV DKVLDPVHVP GRGAPKKRLQ SKTKKSRSQN ICGYCKKPGH NRRKCAKLLE  720
VRNMFIFFLH VFCS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	88	DRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-99	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG003910.7