PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG003040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 296aa    MW: 32380.4 Da    PI: 4.935
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG003040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.85.9e-1195143355
                       HHHHHH.HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahner.ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++n++ Er RR+r+N+++  +r ++P+      +K++Ka+i + Av YI +Lq
  TRIDC3BG003040.1  95 ASKNIVeERDRRRRLNEKLYAIRGVVPNI-----TKMDKASIIQDAVAYIEELQ 143
                       5555552799******************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
AKPSKERGRG QREKQSRAME GGMDASLDFL ELEAHLVFDL GDADSSKRWM SLADCCSSYL  60
PAEDSLSGLD SSCYNDPTSS PDGATSSRST ASTRASKNIV EERDRRRRLN EKLYAIRGVV  120
PNITKMDKAS IIQDAVAYIE ELQEQERRIL AEVSDLEAGS CTAVVVKSEA STGSEGVEDA  180
GVGFSTRKKM RRTASSSSIN DTVTSPATHP ILLELEVRPI AEKLAVVSMR HDNAQNVMAK  240
MYKALDSLCL KVITSSVTVV DGRTVHTMFI ETEEMDSVET IKEMVQAALS HLDFSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-37bHLH family protein