PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG070360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 161aa MW: 16152.2 Da PI: 5.4677 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 97.6 | 2.4e-30 | 2 | 85 | 81 | 154 |
DUF702 81 kkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++q+++s+t++s+a+++++ +t+s lP++v+++avfrcvrv+svddge+e+aYq++v+i+GhvfkG+LydqG+++ TRIDC3AG070360.1 2 SQQATTSHTSTSNATTPRSYDTTSshqdasfrgyLPRQVRAPAVFRCVRVTSVDDGEDEYAYQATVTINGHVFKGFLYDQGVDD 85 5788999999999999999999988999*****************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
SSQQATTSHT STSNATTPRS YDTTSSHQDA SFRGYLPRQV RAPAVFRCVR VTSVDDGEDE 60 YAYQATVTIN GHVFKGFLYD QGVDDGRASN DMDSSTGGAV PNMSELHLGG GGGNAARGGG 120 GSSSMAPSDM YGGGGAGGAG GGGGGQQHIL GGGSSYGNTM N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 7e-27 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG070360.1 |