PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG063650.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 771aa    MW: 86389.4 Da    PI: 6.4776
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG063650.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.4e-2378179199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3AG063650.3  78 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 166
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3AG063650.3 167 GESGELRVGVRRA 179
                       49999*****996 PP
2Auxin_resp1072.1e-35204285183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3AG063650.3 204 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 285
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    
QVEASMNQVA ANQMRLYDLP SKLLCRVLNV ELKAEADTDE VYAQVMLMPE PEQSEATTDK  60
SSPATGGATP ARPAVRSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMT QSPPTQELVA  120
KDLHGMEWRF RHIFRGQPRR HLLQSGWSVF VSSKRLVAGD AFIFLRGESG ELRVGVRRAM  180
RQLSNIASSV ISSHSMHLGV LATAWHAINT KTMFTVYYKP RTSRSEFIIP YDKYMESVKN  240
IYSIGTRFKM RFEGEEAPEQ RFTGTIVGSD NLDQLWPESS WRSLKVRWDE SSTIPRPDRV  300
SPWEIEPASS PPVNPLPLSR PKRSRPNVPP ASPESSVRTK EGATRADMDC AQAQRNQNNT  360
ALPGQEQRSN KLTEINDFDA TVQKPMMWSP PPPPNIGKNN SLTFQQRPSV HNSIQLGRRE  420
TDFKDASSGA QPFGDSLGFF MQTTFDEAPN RLSSFKNQFQ DHSYARQYAD PYLFMHQQPS  480
LTVESSRKMH TENNELHFWN GPSTAYGNSR DQAQDFRFTE HQSNWLSPQF SRAEQPRVIR  540
PHASIAPIEL EKTTEGSDFK IFGFKVDTAS AGFNHLNSPM DGTHEPVLQT QPSVSLDHLQ  600
TDCSPEVSLS IAGTTENEKN TQQCPQSSKD VQSKSHGAST RSCTKVHKQG VALGRSVDLS  660
KFVDYDELTA ELDKMFEFDG ELMSSNKNWQ IVYTDNEGDM MLVGDDPWEE FCSIVRKICI  720
YTKEEVQKMN SKPSGPRKEE GSLDGDGASE KAHLPASSDL NSSQLGCVKA D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein