PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG063650.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 793aa    MW: 88846.3 Da    PI: 6.4425
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG063650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.5e-23100201199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3AG063650.1 100 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 188
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3AG063650.1 189 GESGELRVGVRRA 201
                       49999*****996 PP
2Auxin_resp106.92.2e-35226307183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3AG063650.1 226 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 307
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    
GPLVTVPRVG DMVYYFPQGH IEQVEASMNQ VAANQMRLYD LPSKLLCRVL NVELKAEADT  60
DEVYAQVMLM PEPEQSEATT DKSSPATGGA TPARPAVRSF CKTLTASDTS THGGFSVLRR  120
HADECLPPLD MTQSPPTQEL VAKDLHGMEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA  180
GDAFIFLRGE SGELRVGVRR AMRQLSNIAS SVISSHSMHL GVLATAWHAI NTKTMFTVYY  240
KPRTSRSEFI IPYDKYMESV KNIYSIGTRF KMRFEGEEAP EQRFTGTIVG SDNLDQLWPE  300
SSWRSLKVRW DESSTIPRPD RVSPWEIEPA SSPPVNPLPL SRPKRSRPNV PPASPESSVR  360
TKEGATRADM DCAQAQRNQN NTALPGQEQR SNKLTEINDF DATVQKPMMW SPPPPPNIGK  420
NNSLTFQQRP SVHNSIQLGR RETDFKDASS GAQPFGDSLG FFMQTTFDEA PNRLSSFKNQ  480
FQDHSYARQY ADPYLFMHQQ PSLTVESSRK MHTENNELHF WNGPSTAYGN SRDQAQDFRF  540
TEHQSNWLSP QFSRAEQPRV IRPHASIAPI ELEKTTEGSD FKIFGFKVDT ASAGFNHLNS  600
PMDGTHEPVL QTQPSVSLDH LQTDCSPEVS LSIAGTTENE KNTQQCPQSS KDVQSKSHGA  660
STRSCTKVHK QGVALGRSVD LSKFVDYDEL TAELDKMFEF DGELMSSNKN WQIVYTDNEG  720
DMMLVGDDPW EEFCSIVRKI CIYTKEEVQK MNSKPSGPRK EEGSLDGDGA SEKAHLPASS  780
DLNSSQLGCV KAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein