PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062500.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 758aa    MW: 85037.1 Da    PI: 6.7517
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062500.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.36.2e-2387188199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3AG062500.6  87 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 175
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3AG062500.6 176 GESGELRVGVRRA 188
                       49999*****996 PP
2Auxin_resp111.39.3e-37213294183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3AG062500.6 213 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 294
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
LLLPAGAHRA EVEASMNQIA GNQMRLYDLP SKLLCRVINV ELKAEADTDE VYAQVMLMPE  60
PEQNEMAVDK STSTTGATPP RPAVRSFCKT LTASDTSTHG GFSVLRRHAD ECLPPLDMTQ  120
SPPTQELVAK DLHGMDWRFR HIFRGQPRRH LLQSGWSVFV SSKRLVAGDA FIFLRGESGE  180
LRVGVRRAMR QLSNVPSSVI SSHSMHLGVL ATAWHAINTK SMFTVYYKPR TSPSEFIIPY  240
DQYMESVKNN YSIGMRFRMR FEGEEAPEQR FTGTIVGSEN LDQLWPESNW RSLKVRWDEP  300
STIPRPDRVS PWKIEPASSP PVNPLPLSRV KRPRPNVPPV SPESSVLTKE VAAKIDMDSA  360
QAQQRNQNNM VLQGQEHMTL RTNNLTASNE SDATVQKPMM WSPSPNIGKN HASAFQQRPS  420
MDNWMQLGRC DASSGAQSFG DSQGFFMQTF DEAPNRHGSF KNQFQDHSSA RHFSDPYTKM  480
QTEASEFHFW NSQSTVYGNP RDQSQGFRFE EHPSNWLRQQ QQFSPVEQPR VIRPHASIAP  540
VDLEKTREGS GFKIFGFKVD TTSAPSNHLS STMAAIHEPV LQTQASASLT QLQHAHADCI  600
PELSVSTAGT TENEKSIQQA PHSSKDVQSK SHGASTRSCT KVHKQGVALG RSVDLSKFGD  660
YDELTAELDR MFEFDGELMS SNKDWQIVYT DPEGDMMLVG DDPWEEFCNI VRKIFIYTKE  720
EVQKMNSKSS TPRKEEGSAD ADGANEKARP ATSSHLDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1331335KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein