PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG062500.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 630aa MW: 70802.5 Da PI: 8.3913 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 72.7 | 4.7e-23 | 72 | 173 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++ +++a+e+ +++++ ++l+ +d++g W++++i+r++++r++l++GW+ Fv++++L +gD ++F + TRIDC3AG062500.3 72 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 160 99*****************************7555544..58************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+v+v+r+ TRIDC3AG062500.3 161 GESGELRVGVRRA 173 49999*****996 PP | |||||||
2 | Auxin_resp | 111.7 | 7.2e-37 | 198 | 279 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+ Wp+S+WrsLk TRIDC3AG062500.3 198 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 279 89******************************************************************999.9********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 630 aa Download sequence |
MNQIAGNQMR LYDLPSKLLC RVINVELKAE ADTDEVYAQV MLMPEPEQNE MAVDKSTSTT 60 GATPPRPAVR SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMTQSPPTQ ELVAKDLHGM 120 DWRFRHIFRG QPRRHLLQSG WSVFVSSKRL VAGDAFIFLR GESGELRVGV RRAMRQLSNV 180 PSSVISSHSM HLGVLATAWH AINTKSMFTV YYKPRTSPSE FIIPYDQYME SVKNNYSIGM 240 RFRMRFEGEE APEQRFTGTI VGSENLDQLW PESNWRSLKV RWDEPSTIPR PDRVSPWKIE 300 PASSPPVNPL PLSRVKRPRP NVPPVSPESS VLTKEVAAKI DMDSAQAQQR NQNNMVLQGQ 360 EHMTLRTNNL TASNESDATV QKPMMWSPSP NIGKNHASAF QQRPSMDNWM QLGRCDASSG 420 AQSFGDSQGF FMQTFDEAPN RHGSFKNQFQ DHSSARHFSD PYTKMQTEAS EFHFWNSQST 480 VYGNPRDQSQ GFRFEEHPSN WLRQQQQFSP VEQPRVIRPH ASIAPVDLEK TREGSGFKIF 540 GFKVDTTSAP SNHLSSTMAA IHEPVLQTQA SASLTQLQHA HADCIPELSV STAGTTENEK 600 SIQQAPHSSK DVQSKSHGAS TRSCTKFMLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 316 | 320 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG062500.3 |