PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062500.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 801aa    MW: 89845.6 Da    PI: 6.8695
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062500.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.26.7e-23130231199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3AG062500.2 130 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 218
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3AG062500.2 219 GESGELRVGVRRA 231
                       49999*****996 PP
2Auxin_resp111.21e-36256337183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3AG062500.2 256 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 337
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 801 aa     Download sequence    
AARRHGAAAG PLRRVFRAGD PLYDELWHAC AGPLVTVPRV GDLVFYFPQG HIEQVEASMN  60
QIAGNQMRLY DLPSKLLCRV INVELKAEAD TDEVYAQVML MPEPEQNEMA VDKSTSTTGA  120
TPPRPAVRSF CKTLTASDTS THGGFSVLRR HADECLPPLD MTQSPPTQEL VAKDLHGMDW  180
RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA GDAFIFLRGE SGELRVGVRR AMRQLSNVPS  240
SVISSHSMHL GVLATAWHAI NTKSMFTVYY KPRTSPSEFI IPYDQYMESV KNNYSIGMRF  300
RMRFEGEEAP EQRFTGTIVG SENLDQLWPE SNWRSLKVRW DEPSTIPRPD RVSPWKIEPA  360
SSPPVNPLPL SRVKRPRPNV PPVSPESSVL TKEVAAKIDM DSAQAQQRNQ NNMVLQGQEH  420
MTLRTNNLTA SNESDATVQK PMMWSPSPNI GKNHASAFQQ RPSMDNWMQL GRCDASSGAQ  480
SFGDSQGFFM QTFDEAPNRH GSFKNQFQDH SSARHFSDPY TKMQTEASEF HFWNSQSTVY  540
GNPRDQSQGF RFEEHPSNWL RQQQQFSPVE QPRVIRPHAS IAPVDLEKTR EGSGFKIFGF  600
KVDTTSAPSN HLSSTMAAIH EPVLQTQASA SLTQLQHAHA DCIPELSVST AGTTENEKSI  660
QQAPHSSKDV QSKSHGASTR SCTKVHKQGV ALGRSVDLSK FGDYDELTAE LDRMFEFDGE  720
LMSSNKDWQI VYTDPEGDMM LVGDDPWEEF CNIVRKIFIY TKEEVQKMNS KSSTPRKEEG  780
SADADGANEK ARPATSSHLD N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1374378KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein