PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062380.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 196aa    MW: 21650.3 Da    PI: 8.2408
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062380.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.21.6e-212494173
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73
                      rWt++e+l+Li+a+r +e+r  +      +W+ vs+++r++g+er+p qC+++w nl+++ kki ++ekk+++
  TRIDC3AG062380.2 24 RWTRHETLVLIQAKRVTEQRAAQ--PVRLKWAVVSAYCRRHGVERGPMQCRKRWGNLSWDLKKIVAWEKKHAA 94
                      8****************998655..5899*****************************************954 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
EMMSANGDSP AGAAVTTPRS RLPRWTRHET LVLIQAKRVT EQRAAQPVRL KWAVVSAYCR  60
RHGVERGPMQ CRKRWGNLSW DLKKIVAWEK KHAAAVAAVA GDADSAAPER ESFWDMRGEE  120
RRARQLPSSF DREVYDAIVG AGGAANQLKP DSAEEMELAD DADEHPPSPM MVMPIQATES  180
AKKPASDKNS TSQQDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-35Trihelix family protein