PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG062200.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 246aa MW: 26801.1 Da PI: 9.6804 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.3e-16 | 73 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ TRIDC3AG062200.4 73 RGHWRPAEDMKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 118 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.9e-17 | 126 | 168 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ TRIDC3AG062200.4 126 RPFSDEEEERLMAAHRFYGNK-WSMIARLFP-GRTDNAVKNHWHV 168 68*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MPSTSACPPW LVRMVAANDD QASSSSSSKG GGAVLTTGTA TIDKGYLGGG GAGSNAADPQ 60 ESSSSGQSRH AARGHWRPAE DMKLRELVAL YGPQNWNLIA EKLDGRSGKS CRLRWFNQLD 120 PRISKRPFSD EEEERLMAAH RFYGNKWSMI ARLFPGRTDN AVKNHWHVIM ARKYREQSIA 180 YRRRKLNQAV QRTLDSSSGL LVAANDSAVF ANPYGFSFSH CCLSFPAGAA AASALEPTFC 240 LFPGDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 3e-72 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG062200.4 |