PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG062200.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 29580.2 Da PI: 9.8427 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.9e-16 | 73 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ TRIDC3AG062200.3 73 RGHWRPAEDMKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 118 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.9e-17 | 126 | 168 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++ eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ TRIDC3AG062200.3 126 RPFSDEEEERLMAAHRFYGNK-WSMIARLFP-GRTDNAVKNHWHV 168 68*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MPSTSACPPW LVRMVAANDD QASSSSSSKG GGAVLTTGTA TIDKGYLGGG GAGSNAADPQ 60 ESSSSGQSRH AARGHWRPAE DMKLRELVAL YGPQNWNLIA EKLDGRSGKS CRLRWFNQLD 120 PRISKRPFSD EEEERLMAAH RFYGNKWSMI ARLFPGRTDN AVKNHWHVIM ARKYREQSIA 180 YRRRKLNQAV QRTLDSSSGV AAGAGHVDVV GHRHNHLLVA ANDSAVFANP YGFSFSHCCL 240 SFPAGAAAAS ALEPTFCLFP GDSTAISKLF TLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 6e-72 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG062200.3 |