PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG062200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 268aa    MW: 28886.3 Da    PI: 9.8593
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG062200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.8e-1673118147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg W + Ed +l ++v+++G+ +W++Ia+++  gR++k+c++rw++ 
  TRIDC3AG062200.1  73 RGHWRPAEDMKLRELVALYGPQNWNLIAEKLD-GRSGKSCRLRWFNQ 118
                       899*****************************.***********996 PP
2Myb_DNA-binding53.26.7e-17126168246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        +++ eE+e+l  a++ +G++ W+ Iar ++ gRt++ +k++w+ 
  TRIDC3AG062200.1 126 RPFSDEEEERLMAAHRFYGNK-WSMIARLFP-GRTDNAVKNHWHV 168
                       68*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MPSTSACPPW LVRMVAANDD QASSSSSSKG GGAVLTTGTA TIDKGYLGGG GAGSNAADPQ  60
ESSSSGQSRH AARGHWRPAE DMKLRELVAL YGPQNWNLIA EKLDGRSGKS CRLRWFNQLD  120
PRISKRPFSD EEEERLMAAH RFYGNKWSMI ARLFPGRTDN AVKNHWHVIM ARKYREQSIA  180
YRRRKLNQAV QRTLDSSSGV AAGAGHVDVV GHRHNHLLVA ANDSAVFANP YGFSFSHCCL  240
SFPAGAAAAS ALEPTFCLFP GPGAASNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.18e-72MYB family protein