PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061500.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 161aa    MW: 17845.8 Da    PI: 10.125
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061500.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.65.2e-261160251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie+ + rqv fskRr+g++KKA+EL vLCdaev++++fs+ g+lyey+s
  TRIDC3AG061500.3 11 RIEDRTSRQVRFSKRRAGLFKKAFELAVLCDAEVSLLVFSPAGRLYEYAS 60
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MARRGRVELR RIEDRTSRQV RFSKRRAGLF KKAFELAVLC DAEVSLLVFS PAGRLYEYAS  60
SVSIEGTYDR YQAFARAGKD VNEPGASNNN DGDPSNIQSR LKEITSWSLQ NNADDSDANE  120
LEKLEKLLTD ALKNTRSKKG AGTSASGENS GRPRGQKEGR T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30260.12e-33MIKC_MADS family protein