PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG061340.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CAMTA | ||||||||
Protein Properties | Length: 836aa MW: 94218.6 Da PI: 7.0297 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 151.8 | 1.5e-47 | 16 | 131 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e+++iL+n e + +++ +++rp+ gs++L+nr++ r+fr+DGy w+kkk+gk+ +E+he LKv++v++l+cyYa++e+np f TRIDC3AG061340.3 16 REvKTRWLKPREVLDILQNCELFGIQNRTPQRPPGGSWFLFNRRVHRFFRNDGYVWQKKKNGKSGNEAHEYLKVDNVKALNCYYARAENNPRF 108 56699**************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 rr+yw+Le ++e+ivlvhy++v TRIDC3AG061340.3 109 MRRIYWMLEPAYEHIVLVHYRDV 131 ********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 836 aa Download sequence |
MQQQQRQGHD ILNLQREVKT RWLKPREVLD ILQNCELFGI QNRTPQRPPG GSWFLFNRRV 60 HRFFRNDGYV WQKKKNGKSG NEAHEYLKVD NVKALNCYYA RAENNPRFMR RIYWMLEPAY 120 EHIVLVHYRD VLEGSISVSV LNGSPTSNQN GSASRADAHS SPGLTSEIVA PLLNSCSPGS 180 AEEVSSQIPT INNETNDISL FDWRRTLEMQ LSLENKERHD VNTDEVLPNH DPIPAHGIQN 240 EELDACINLA DVFDLGFSED NHAEGSHPYP DPIDVLKYSE TWLEDDQLKS ILHSAPVTID 300 ENQWFHLHEV SPEWAFCSES AKVVIVGDFP CNLSNSSWVL FGDVKVPAVV VQQGVIRCYT 360 PPYLGAGKVR MCMLDENGKP CTEDREFEFV EKPTNTMING NGKPCSEARE FEFQQRPTKS 420 DNGLLLLINY VQMLFDSHGC ELFSKFRLPL PNARSGFPVN PSEIIGRTCE QLDHENAVNC 480 IMEVMLNNKF QDWLSSKFEQ NSEGEYLLPR QYHGVIHTIA ALGYDWALKP LLSNGVPINY 540 RDANGWTALH WAARFGREQM VAVLVVAGAA VGALSDPTAE DPAAKTPASI ASAYGFIGIS 600 AFLSEAQLTS TLDSLESKEN GKPVDHNGGV STSNAVDRVS DKCAHVDGGT DDQLALKDSL 660 GAIRNAVQAA GRIQATFRVF SLKKKKQKAL QNGDSSASPS MLERATLSIQ KNFRCWKKRK 720 EYQKIRKNVI KIQARFRAHR ERNKYKELLQ SVGILEKIML RWFRKGVGLR GINSRAMPID 780 QDEEEDIVKV FRKERVETAV SEAVSRVSAI VGCPVARLDY RRMLEMHQQA KIGHGK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 683 | 720 | KKKKQKALQNGDSSASPSMLERATLSIQKNFRCWKKRK |
2 | 717 | 746 | KKRKEYQKIRKNVIKIQARFRAHRERNKYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 5e-95 | CAMTA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG061340.3 |