PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG061260.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 318aa MW: 34064.5 Da PI: 7.9252 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 46.5 | 9.4e-15 | 31 | 62 | 47 | 78 |
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh l efDe krsCr+rL++hn+rrrk+q+ TRIDC3AG061260.5 31 QRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQP 62 59***************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
WRDAPHDFHL GGFQTENSSR MLLEDRDRGS QRFHLLGEFD EVKRSCRKRL DGHNRRRRKP 60 QPDPLNPAGL FANHHGVTRF ASYPQIFSPT SMAEPKWPGG IAVKTEADAF HEQYYSFSGA 120 ASLFHHGKPE RKHFPFLTDG GGEAAFGCQP PAFTITPSSE SSSNSSRHSN GKTTMFAHDG 180 GPDHNCALSL LSDSPAPAHI MVPAEAHHLG GGGVTIQYGG GGGGKVARLS SNGDVSLTGL 240 SYVSLGDKGA AMLHASNRSQ HAAATATTAV TTSTAAAPAA SQLQQQYHGY YHHQHQVSAD 300 QGNHPDAGGM HALPFSSW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 43 | 60 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 1e-16 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG061260.5 |