PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061260.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 297aa    MW: 31660.9 Da    PI: 8.5063
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061260.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP68.61.3e-212413978
                      EEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP 39 eqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      +qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+
  TRIDC3AG061260.4  2 QQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQP 41
                      8************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
QQQRFCQQCS RFHLLGEFDE VKRSCRKRLD GHNRRRRKPQ PDPLNPAGLF ANHHGVTRFA  60
SYPQIFSPTS MAEPKWPGGI AVKTEADAFH EQYYSFSGAA SLFHHGKPER KHFPFLTDGG  120
GEAAFGCQPP AFTITPSSES SSNSSRHSNG KTTMFAHDGG PDHNCALSLL SDSPAPAHIM  180
VPAEAHHLGG GGVTIQYGGG GGGKVARLSS NGDVSLTGLS YVSLGDKGAA MLHASNRSQH  240
AAATATTAVT TSTAAAPAAS QLQQQYHGYY HHQHQVSADQ GNHPDAGGMH ALPFSSW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12239KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-15SBP family protein