PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG061260.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 121aa MW: 12510.1 Da PI: 10.2567 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 76.5 | 4.4e-24 | 72 | 119 | 2 | 49 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsr+ TRIDC3AG061260.3 72 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRY 119 ***********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
LSTVVAPSGG GGGGGGGALD LKLGAPTSWR PVPAAAVASV QQQQQQPPPP SAAPAPAKRA 60 RAGQGQQTVP PCSVEGCTAD LSRCREYHRR HKVCEAHSKT PVVAVAGQQQ RFCQQCSRYT 120 R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 2e-22 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG061260.3 |