PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG061260.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 367aa MW: 39233.5 Da PI: 8.9528

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG061260.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	8.3e-42	84	160	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ TRIDC3AG061260.2 84 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQP 160 **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MDSWEHKMPS WDLSTVVAPS GGGGGGGGGA LDLKLGAPTS WRPVPAAAVA SVQQQQQQPP 60 PPSAAPAPAK RARAGQGQQT VPPCSVEGCT ADLSRCREYH RRHKVCEAHS KTPVVAVAGQ 120 QQRFCQQCSR FHLLGEFDEV KRSCRKRLDG HNRRRRKPQP DPLNPAGLFA NHHGVTRFAS 180 YPQIFSPTSM AEPKWPGGIA VKTEADAFHE QYYSFSGAAS LFHHGKPERK HFPFLTDGGG 240 EAAFGCQPPA FTITPSSESS SNSSRHSNGK TTMFAHDGGP DHNCALSLLS YVSLGDKGAA 300 MLHASNRSQH AAATATTAVT TSTAAAPAAS QLQQQYHGYY HHQHQVSADQ GNHPDAGGMH 360 ALPFSSW

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MDSWEHKMPS WDLSTVVAPS GGGGGGGGGA LDLKLGAPTS WRPVPAAAVA SVQQQQQQPP  60
PPSAAPAPAK RARAGQGQQT VPPCSVEGCT ADLSRCREYH RRHKVCEAHS KTPVVAVAGQ  120
QQRFCQQCSR FHLLGEFDEV KRSCRKRLDG HNRRRRKPQP DPLNPAGLFA NHHGVTRFAS  180
YPQIFSPTSM AEPKWPGGIA VKTEADAFHE QYYSFSGAAS LFHHGKPERK HFPFLTDGGG  240
EAAFGCQPPA FTITPSSESS SNSSRHSNGK TTMFAHDGGP DHNCALSLLS YVSLGDKGAA  300
MLHASNRSQH AAATATTAVT TSTAAAPAAS QLQQQYHGYY HHQHQVSADQ GNHPDAGGMH  360
ALPFSSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	158	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-34	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG061260.2