PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG061260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 195aa MW: 21307.2 Da PI: 10.7147 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135 | 2.4e-42 | 84 | 160 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C vegC+adls+++eyhrrhkvCe+hsk+pvv+v+g++qrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ TRIDC3AG061260.1 84 CSVEGCTADLSRCREYHRRHKVCEAHSKTPVVAVAGQQQRFCQQCSRFHLLGEFDEVKRSCRKRLDGHNRRRRKPQP 160 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MDSWEHKMPS WDLSTVVAPS GGGGGGGGGA LDLKLGAPTS WRPVPAAAVA SVQQQQQQPP 60 PPSAAPAPAK RARAGQGQQT VPPCSVEGCT ADLSRCREYH RRHKVCEAHS KTPVVAVAGQ 120 QQRFCQQCSR FHLLGEFDEV KRSCRKRLDG HNRRRRKPQP DPLNPAGLFA NHHAGKLRFL 180 ALPFCRKQEK NVIHH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 141 | 158 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 8e-33 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG061260.1 |