PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG059850.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 483aa MW: 50710.6 Da PI: 6.6777

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG059850.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.2	1.6e-09	284	331	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq TRIDC3AG059850.2 284 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 331 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
QPDQLPPATA GFLNLNWDSS MDASHPMASS PASNSAAATE GLALHGISPR PQPHYGAGGT 60 PLGSPTKLNL SMMGQYRHHH HHSPYPPPPP QVRGAGLPTL ENLMPMGSLD QFLADPGFAE 120 RAARLSGFDA RGGYGPGGPG PAQFGLPDDG PVGALKELEL GSARDDSSVS DPASAGAGMA 180 LKGASDGNAR KRKAGGGGSK GKGKDASVST TSAKDLLAKE DSASKRCRSM SMEEAEENSG 240 KGKAAQSSSE NGGRRQGKDG ASKLPEPPKD FIHVRARRGE ATDSHSLAER VRREKISQRM 300 KLLQDLVPGC NKVVGKAVML DEIINYVQSL QRQVEFLSMK LATVNPQLDF NSLPSLLAKD 360 MQQQSCGQLQ QGSSHFFPLD ASGAPLPYMG GQGSSDPLGC GMSDGGGMGD DHGAMHPLDQ 420 AFCRPMGSQQ QHFLSDAAAS QVGAFWQDLQ SVVQMDMGQS QEIATSSNSY DGSLQTVHMK 480 MEL

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

QPDQLPPATA GFLNLNWDSS MDASHPMASS PASNSAAATE GLALHGISPR PQPHYGAGGT  60
PLGSPTKLNL SMMGQYRHHH HHSPYPPPPP QVRGAGLPTL ENLMPMGSLD QFLADPGFAE  120
RAARLSGFDA RGGYGPGGPG PAQFGLPDDG PVGALKELEL GSARDDSSVS DPASAGAGMA  180
LKGASDGNAR KRKAGGGGSK GKGKDASVST TSAKDLLAKE DSASKRCRSM SMEEAEENSG  240
KGKAAQSSSE NGGRRQGKDG ASKLPEPPKD FIHVRARRGE ATDSHSLAER VRREKISQRM  300
KLLQDLVPGC NKVVGKAVML DEIINYVQSL QRQVEFLSMK LATVNPQLDF NSLPSLLAKD  360
MQQQSCGQLQ QGSSHFFPLD ASGAPLPYMG GQGSSDPLGC GMSDGGGMGD DHGAMHPLDQ  420
AFCRPMGSQQ QHFLSDAAAS QVGAFWQDLQ SVVQMDMGQS QEIATSSNSY DGSLQTVHMK  480
MEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	4e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG059850.2