PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058850.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 391aa MW: 43238.7 Da PI: 8.9661

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058850.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.4	8.8e-10	273	321	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++l TRIDC3AG058850.7 273 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNLL 321 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MGLTNSCDVQ SSGCVVKDYK IVCKDAKYEL PTIGGIPKAE VEATSLVRYQ VLGPGNERDT 60 PSCSYYRSED QQRSSNRLKG VSTDNDESEG TLQDEQGAAK RLRKPTKRYI EELSDTETLD 120 STGKLSSPGK RVAHGEVLLR QRVTPLQEVD SLSITYPTRK DTFGGFSVHV PYASRMRRGR 180 PRRNFISFLD DDPPVECPEV QMAVETMLGK DGEHVNHASS AVEVPLTETA EKKGGHIETA 240 DNKEIHSIEP EDICRTDAKT KTKRGLKRKH HRAWTLSEVL KLVDGVAQFG PGKWSEIRRL 300 SFASYSYRTS VDLKDKWRNL LRASQTQLSP ENDGVCPRKS NPSIIPIPPA ILLRVKELAE 360 LQPQAGNLAA AIKFSGQSSK AAQGRGSSGF L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MGLTNSCDVQ SSGCVVKDYK IVCKDAKYEL PTIGGIPKAE VEATSLVRYQ VLGPGNERDT  60
PSCSYYRSED QQRSSNRLKG VSTDNDESEG TLQDEQGAAK RLRKPTKRYI EELSDTETLD  120
STGKLSSPGK RVAHGEVLLR QRVTPLQEVD SLSITYPTRK DTFGGFSVHV PYASRMRRGR  180
PRRNFISFLD DDPPVECPEV QMAVETMLGK DGEHVNHASS AVEVPLTETA EKKGGHIETA  240
DNKEIHSIEP EDICRTDAKT KTKRGLKRKH HRAWTLSEVL KLVDGVAQFG PGKWSEIRRL  300
SFASYSYRTS VDLKDKWRNL LRASQTQLSP ENDGVCPRKS NPSIIPIPPA ILLRVKELAE  360
LQPQAGNLAA AIKFSGQSSK AAQGRGSSGF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	5e-50	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058850.7