PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058850.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 570aa MW: 63156.6 Da PI: 6.4591

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058850.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	452	500	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++l TRIDC3AG058850.6 452 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNLL 500 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSDDS LDIPSKCTVV 60 HDHKPDTEQG DNNIVHQDNA STETPKSTVL NDSCSAEKEK TDACSRSVNN SSTGPSVSGV 120 TSSVPDFSIL RGEVCLDNLT IRELQEAFRA TFGRETTVKD KLWLKRRITM GLTNSCDVQS 180 SGCVVKDYKI VCKDAKYELP TIGGIPKAEV EATSLVRYQV LGPGNERDTP SCSYYRSEDQ 240 QRSSNRLKGV STDNDESEGT LQDEQGAAKR LRKPTKRYIE ELSDTETLDS TGKLSSPGKR 300 VAHGEVLLRQ RVTPLQEVDS LSITYPTRKD TFGGFSVHVP YASRMRRGRP RRNFISFLDD 360 DPPVECPEVQ MAVETMLGKD GEHVNHASSA VEVPLTKNAE KKGGHIETAE KKGGHIETAD 420 NKEIHSIEPE DICRTDAKTK TKRGLKRKHH RAWTLSEVLK LVDGVAQFGP GKWSEIRRLS 480 FASYSYRTSV DLKDKWRNLL RASQTQLSPE NDGVCPRKSN PSIIPIPPAI LLRVKELAEL 540 QPQAGNLAAA IKFSGQSSKA AQGRGSSGFL

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSDDS LDIPSKCTVV  60
HDHKPDTEQG DNNIVHQDNA STETPKSTVL NDSCSAEKEK TDACSRSVNN SSTGPSVSGV  120
TSSVPDFSIL RGEVCLDNLT IRELQEAFRA TFGRETTVKD KLWLKRRITM GLTNSCDVQS  180
SGCVVKDYKI VCKDAKYELP TIGGIPKAEV EATSLVRYQV LGPGNERDTP SCSYYRSEDQ  240
QRSSNRLKGV STDNDESEGT LQDEQGAAKR LRKPTKRYIE ELSDTETLDS TGKLSSPGKR  300
VAHGEVLLRQ RVTPLQEVDS LSITYPTRKD TFGGFSVHVP YASRMRRGRP RRNFISFLDD  360
DPPVECPEVQ MAVETMLGKD GEHVNHASSA VEVPLTKNAE KKGGHIETAE KKGGHIETAD  420
NKEIHSIEPE DICRTDAKTK TKRGLKRKHH RAWTLSEVLK LVDGVAQFGP GKWSEIRRLS  480
FASYSYRTSV DLKDKWRNLL RASQTQLSPE NDGVCPRKSN PSIIPIPPAI LLRVKELAEL  540
QPQAGNLAAA IKFSGQSSKA AQGRGSSGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	8e-75	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058850.6