PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058850.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 628aa MW: 69566.5 Da PI: 4.8531

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058850.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.5	1.7e-09	510	558	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E ++lvd+v+q+G+g W+ I r Rt ++k++w+++l TRIDC3AG058850.5 510 AWTLSEVLKLVDGVAQFGPGKWSEIRRLSFasySYRTSVDLKDKWRNLL 558 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MEVETLQDAE ETKNGGNDFE ENGSLDPVVY QLVRVEGDGT LVPPTEDEVL QIEQFLDDKV 60 DLPSIDDVGN VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSDDS 120 LDIPSKCTVV HDHKPDTEQG DNNIVHQDNA STETPKSTVL NDSCSAEKEK TDACSRSVNN 180 SSTGPSVSGV TSSVPDFSIL RGEVCLDNLT IRELQEAFRA TFGRETTVKD KLWLKRRITM 240 GLTNSCDVQS SGCVVKDYKI VCKDAKYELP TIGGIPKAEV EATSLVRYQV LGPGNERDTP 300 SCSYYRSEDQ QRSSNRLKGV STDNDESEGT LQDEQGAAKR LRKPTKRYIE ELSDTETLDS 360 TGKLSSPGKR VAHGEVLLRQ RVTPLQEVDS LSITYPTRKD TFGGFSVHVP YASRMRRGRP 420 RRNFISFLDD DPPVECPEVQ MAVETMLGKD GEHVNHASSA VEVPLTAEKK GGHIETADNK 480 EIHSIEPEDI CRTDAKTKTK RGLKRKHHRA WTLSEVLKLV DGVAQFGPGK WSEIRRLSFA 540 SYSYRTSVDL KDKWRNLLRA SQTQLSPEND GVCPRKSNPS IIPIPPAILL RVKELAELQP 600 QAGNLAAAIK FSGQSSKAAQ GRGSSGFL

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MEVETLQDAE ETKNGGNDFE ENGSLDPVVY QLVRVEGDGT LVPPTEDEVL QIEQFLDDKV  60
DLPSIDDVGN VEDFFTNDCM LLKEPDFEEG YSELETNGEI HTQQFDADLE VDRLKPSDDS  120
LDIPSKCTVV HDHKPDTEQG DNNIVHQDNA STETPKSTVL NDSCSAEKEK TDACSRSVNN  180
SSTGPSVSGV TSSVPDFSIL RGEVCLDNLT IRELQEAFRA TFGRETTVKD KLWLKRRITM  240
GLTNSCDVQS SGCVVKDYKI VCKDAKYELP TIGGIPKAEV EATSLVRYQV LGPGNERDTP  300
SCSYYRSEDQ QRSSNRLKGV STDNDESEGT LQDEQGAAKR LRKPTKRYIE ELSDTETLDS  360
TGKLSSPGKR VAHGEVLLRQ RVTPLQEVDS LSITYPTRKD TFGGFSVHVP YASRMRRGRP  420
RRNFISFLDD DPPVECPEVQ MAVETMLGKD GEHVNHASSA VEVPLTAEKK GGHIETADNK  480
EIHSIEPEDI CRTDAKTKTK RGLKRKHHRA WTLSEVLKLV DGVAQFGPGK WSEIRRLSFA  540
SYSYRTSVDL KDKWRNLLRA SQTQLSPEND GVCPRKSNPS IIPIPPAILL RVKELAELQP  600
QAGNLAAAIK FSGQSSKAAQ GRGSSGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-81	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058850.5