PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG057600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 173aa MW: 17707.6 Da PI: 8.4618 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 1e-16 | 20 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr+++ +g+Wv+eIr+p + r r +lg++ t+e Aa a++ a l+g TRIDC3AG057600.1 20 CRYKGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATPEAAAVAHDTAVYFLRG 70 78*****777.**********943...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
WSAMSSAEAS AARGGEEERC RYKGVRRRRW GKWVSEIRVP GTRERLWLGS YATPEAAAVA 60 HDTAVYFLRG GALSGNGAAG LNFPERAAAA YGAGSVAPLS PRSVQSVASD AGMAADAQLV 120 AARDGAPGQH YAEARAGAGA AQGGANARTG GGGGSREQLV TGELSVDDME ILM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 1e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG057600.1 |