PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG056320.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 510aa    MW: 53975 Da    PI: 8.8209
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG056320.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-11261317155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  TRIDC3AG056320.3 261 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 317
                       57*******************4444.2455535555.779999**************98 PP
2AP247.35.3e-15360411155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  TRIDC3AG056320.3 360 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 411
                       57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MATVNNWLGF SLSPQELPPS AAASGDVSGA DVCYNIPQDW NMRGSELSAL VAEPKLEDFL  60
GGISYSDHHH HHKQAGGNNM VVPAGSGSGG AACYTTSGGS SVGYLYHPSS ASLQFADSVM  120
VASSGGGVLH DGAGIMANTT ANGDLNNGSS GGGIGLSMIK SWLRSQPSPA QPPEQQRADA  180
AAQGLSLSMN MAACMPPLVG GERGVPELAI VRKDDTAGGS SAGSGAVVSA GGADSTGGSS  240
GVVVETPASR KTADTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGRQGGYDK  300
EEKAARAYDL AALKYWGATT TTNFPVNNYE KELEEMKHMT RQEFVASLRR KSSGFSRGAS  360
IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GLNAVTNFDM  420
TRYDVKSILD STALPIGSAA KRLKDAEAAT ASSLALQQQQ HAGVVSGYDM GALAAYGAAY  480
HHHHPSVGFQ RRWWTHVPPL RPCAAAARVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.11e-119AP2 family protein