PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG056320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 317aa    MW: 33699.4 Da    PI: 8.863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG056320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.22.7e-152576155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  TRIDC3AG056320.2 25 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 76
                      57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MKHMTRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  60
EEAAEAYDIA AIKFRGLNAV TNFDMTRYDV KSILDSTALP IGSAAKRLKD AEAATASSLA  120
LQQQQHAGVV SGYDMGALAA YGAAYHHHHP SVAGAVAWPT IAFQAPPHQV SSGGGGHMYH  180
PYAHAQPLRG WCKQEPDHAV IAAAHSLQEL HHLNLGAGGG AHDFFSQHAQ VMQQQHGGLG  240
SIDNAAGASL EHSTGSNSVV YNNGGVESYM LPMSTTTTAT ASHAREQVAA HAHARAVAAQ  300
AYSGGNMSRD HDDGKIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17430.12e-60AP2 family protein