PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG054050.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 271aa MW: 30453.2 Da PI: 9.4968 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.5 | 4.6e-08 | 213 | 246 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + TRIDC3AG054050.6 213 KWPYPTEEDKAQLVQETGLQLKQINNWFINQRKR 246 569*****************************87 PP | |||||||
2 | ELK | 29.6 | 1.5e-10 | 167 | 188 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC3AG054050.6 167 ELKHELKQGYREKLVDIREEIL 188 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
CRPSSSSPLP SPHWFVLCAG QAAAAGGARR LPPRRHPRQP APPHRRADRR ARPAARAPAA 60 APAGGEELDL FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA CWELEQTLQS LTGASPGEGT 120 GATMSDDEDN PVDSESNMFD GNDVSDGMGF GMLTEGERSL VERVRQELKH ELKQGYREKL 180 VDIREEILRK RRAGKLPGDT ASTLKAWWQA HAKWPYPTEE DKAQLVQETG LQLKQINNWF 240 INQRKRNWHS NPTSSSSDKS KRKRYGDRNN A |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 54 | DRRARPA |
2 | 244 | 264 | RKRNWHSNPTSSSSDKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 1e-115 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG054050.6 |