PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG052650.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 351aa MW: 38033.7 Da PI: 6.7657

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG052650.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.4e-16	47	92	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v + G ++W+tIar ++ gR++k+c++rw + TRIDC3AG052650.5 47 KGPWSPEEDAVLTNLVMRDGARNWTTIARGIP-GRSGKSCRLRWCNQ 92 79****************************.*********985 PP
2	Myb_DNA-binding	55.1	1.8e-17	99	143	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+eEd+ ++ a++ +G++ W++Ia+ + gRt++ +k++w++ TRIDC3AG052650.5 99 RKPFTEEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 143 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MSSETAVSPQ PLSSSPPTAA VSAHSSPAPA ADEPEAPDPP RPDERVKGPW SPEEDAVLTN 60 LVMRDGARNW TTIARGIPGR SGKSCRLRWC NQLDPQLKRK PFTEEEDQMI ISAHAIHGNK 120 WASIAKLLVG RTDNAIKNHW NSTLRRRYCT GTRCTRSASA EQPMREMSRA VSEERWPLSG 180 PSSFSVMEVK EAPVQTVSET SAGALQIRDI NNCSTEAVDR SYPVRPVATV GAFRPYSLGP 240 AQQMQMEMSS STKFVPTIQA LTPEIAVSKF ADTTCFAADV PNKCGHGCCS AEEQPRNNSL 300 LGPEFKEFID HPPILSSSFA SLVSEISSIA WMNGGLQSSN SGNLVQSNPP A

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MSSETAVSPQ PLSSSPPTAA VSAHSSPAPA ADEPEAPDPP RPDERVKGPW SPEEDAVLTN  60
LVMRDGARNW TTIARGIPGR SGKSCRLRWC NQLDPQLKRK PFTEEEDQMI ISAHAIHGNK  120
WASIAKLLVG RTDNAIKNHW NSTLRRRYCT GTRCTRSASA EQPMREMSRA VSEERWPLSG  180
PSSFSVMEVK EAPVQTVSET SAGALQIRDI NNCSTEAVDR SYPVRPVATV GAFRPYSLGP  240
AQQMQMEMSS STKFVPTIQA LTPEIAVSKF ADTTCFAADV PNKCGHGCCS AEEQPRNNSL  300
LGPEFKEFID HPPILSSSFA SLVSEISSIA WMNGGLQSSN SGNLVQSNPP A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-74	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG052650.5