PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG052650.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 231aa MW: 25034.2 Da PI: 7.2743 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.1 | 1.8e-07 | 1 | 23 | 24 | 47 |
HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47 W++Ia+ + gRt++ +k++w++ TRIDC3AG052650.4 1 WASIAKLLV-GRTDNAIKNHWNST 23 *********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
WASIAKLLVG RTDNAIKNHW NSTLRRRYCT GTRCTRSASA EQPMREMSRA VSEERWPLSG 60 PSSFSVMEVK EAPVQTVSET SAGALQIRDI NNCSTEAVDR SYPVRPVATV GAFRPYSLGP 120 AQQMQMEMSS STKFVPTIQA LTPEIAVSKF ADTTCFAADV PNKCGHGCCS AEEQPRNNSL 180 LGPEFKEFID HPPILSSSFA SLVSEISSIA WMNGGLQSSN SGNLVQSNPP A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 2e-24 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG052650.4 |