PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG052650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 280aa    MW: 30604.6 Da    PI: 8.3309
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG052650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-172872147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r+++T+eEd+ ++ a++ +G++ W++Ia+ +  gRt++ +k++w++ 
  TRIDC3AG052650.2 28 RKPFTEEEDQMIISAHAIHGNK-WASIAKLLV-GRTDNAIKNHWNST 72
                      789*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
TIARGIPGRS GKSCRLRWCN QLDPQLKRKP FTEEEDQMII SAHAIHGNKW ASIAKLLVGR  60
TDNAIKNHWN STLRRRYCTG TRCTRSASAE QPMREMSRAV SEERWPLSGP SSFSVMEVKE  120
APVQTVSETS AGALQIRDIN NCSTEAVDRS YPVRPVATVG AFRPYSLGPA QQMQMEMSSS  180
TKFVPTIQAL TPEIAVSKFA DTTCFAADVP NKCGHGCCSA EEQPRNNSLL GPEFKEFIDH  240
PPILSSSFAS LVSEISSIAW MNGGLQSSNS GNLVQSNPPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.13e-60MYB family protein