PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG052440.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 584aa MW: 64156.5 Da PI: 12.1812

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG052440.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.5	6.1e-10	353	390	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + TRIDC3AG052440.3 353 FEHflHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVR 390 554458******************************88 PP
2	BELL	94.6	8.7e-31	218	287	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e q kk++L+s++eeV+krY+qy++q+q+vi+sFe vag +a+p+t+lAl+ ++rhFrc+k +i +q+ TRIDC3AG052440.3 218 AEQQWKKTRLISMMEEVCKRYRQYYQQVQAVIASFESVAGFSNAAPFTALALRVMARHFRCIKGMILSQL 287 5899**************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
APRPTTTSRS TTATCCFITM HTTWRPRPPR RRAGSSTTCR STAGARSSAS RRTPPRTTRP 60 RPLLPTTTTT TSSSTRPGRG RLRPSTPTRP PPPPTRRTAR RCRRQFPQIP TQNFSLSLSS 120 ASSNPATTPP APRKQEPGAA APAAGPYGPF TGYATVLGRS RFLGPAQKLL EEICDVGGAA 180 AHVDHSVPDE GLLDADAMDG ADDAAGHELD TSGPMSGAEQ QWKKTRLISM MEEVCKRYRQ 240 YYQQVQAVIA SFESVAGFSN AAPFTALALR VMARHFRCIK GMILSQLRNT SKMPVKEGMS 300 KDITIFGLGG GGAPVGGFQR GGSVNGFGQP HNIWRPQRGL PERSVTVLRG WLFEHFLHPY 360 PTDGDKQMLA KQTGLTRNQV SNWFINARVR LWKPMVEEIH NLEMRQVHKH SPHDKGQQHG 420 AHGQAHQHSS QQQQQQRSGK RSEPCDSHPG QSSGVTRNHH HHHNAAAAAS SHGGGFPDDL 480 SQMSHSMQQA ARRHGVAAAP PPPSRRRRRG GECWRRRRRR VAHPRPPPEQ QGLLRGAAAG 540 QPRAPVRAGG RGQRPLRDGL VRRRPGPALR QGDRRPPAPR FRRL

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

APRPTTTSRS TTATCCFITM HTTWRPRPPR RRAGSSTTCR STAGARSSAS RRTPPRTTRP  60
RPLLPTTTTT TSSSTRPGRG RLRPSTPTRP PPPPTRRTAR RCRRQFPQIP TQNFSLSLSS  120
ASSNPATTPP APRKQEPGAA APAAGPYGPF TGYATVLGRS RFLGPAQKLL EEICDVGGAA  180
AHVDHSVPDE GLLDADAMDG ADDAAGHELD TSGPMSGAEQ QWKKTRLISM MEEVCKRYRQ  240
YYQQVQAVIA SFESVAGFSN AAPFTALALR VMARHFRCIK GMILSQLRNT SKMPVKEGMS  300
KDITIFGLGG GGAPVGGFQR GGSVNGFGQP HNIWRPQRGL PERSVTVLRG WLFEHFLHPY  360
PTDGDKQMLA KQTGLTRNQV SNWFINARVR LWKPMVEEIH NLEMRQVHKH SPHDKGQQHG  420
AHGQAHQHSS QQQQQQRSGK RSEPCDSHPG QSSGVTRNHH HHHNAAAAAS SHGGGFPDDL  480
SQMSHSMQQA ARRHGVAAAP PPPSRRRRRG GECWRRRRRR VAHPRPPPEQ QGLLRGAAAG  540
QPRAPVRAGG RGQRPLRDGL VRRRPGPALR QGDRRPPAPR FRRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	505	520	RRRRRGGECWRRRRRR
2	506	521	RRRRRGGECWRRRRRR
3	515	520	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-58	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG052440.3