PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG049600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 273aa    MW: 29465 Da    PI: 7.3114
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG049600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.57.3e-25104162258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58 
                        Dg+ WrKYGqK+++gs++pr YYrC+ +  gC ++++v+rs+e+p +++i Y geH++
  TRIDC3AG049600.1 104 ADGFVWRKYGQKDINGSNHPRLYYRCALSgeGCAATRRVQRSQEEPAAFVIAYYGEHTC 162
                       6*************************999889*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MALATPTAVV LELMTMGQQS AAHLRELLRA ASPPVQAEHQ ALAAEILRCC DRVIAAVSAG  60
ATDKKRKATD PGATSCHLPL AMMPSKRRVR GAEAHREVHA DTTADGFVWR KYGQKDINGS  120
NHPRLYYRCA LSGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAAFCQQR AEPLPPTVVD  180
SGSNAWGVFG AVDRNRGSPL LPSLGAEHKH SAVRRHAEAP GDTSRRWSSP SSSSSYSSEV  240
ELGASPVEGF LDGNFDWEWE TVVNSLSFGD LLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-18WRKY family protein