PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG049470.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 229aa MW: 25014.7 Da PI: 6.5926 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.2 | 4e-24 | 22 | 83 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +Dg++WrKYGqK+++g+ fpr YYrCt++ gC++ k+ve+ + dp ++ ++Y+++H+++ TRIDC3AG049470.3 22 HDGFQWRKYGQKVIRGNAFPRCYYRCTYHqdhGCSASKHVEQHnSADPPLFRVVYTNDHTCS 83 7***************************98999*******986157**************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 229 aa Download sequence |
MISDQRKSRI GMRTDYTYAP YHDGFQWRKY GQKVIRGNAF PRCYYRCTYH QDHGCSASKH 60 VEQHNSADPP LFRVVYTNDH TCSGAAATAS DYMASSMHIQ QIADASLRKA DTEAERPPRP 120 QQPRSGGGGY AAAIKEEKDA IVSSLLTVIR GSCDVVKSDT AHEGYSSASL ASNCYAMSSP 180 SVAGGSREGS SSSSVSPVVL PAPDDMGLGL DFMVESHWFE PLDLGWFVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40740.1 | 1e-19 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG049470.3 |