PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG048460.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 552aa MW: 59692.2 Da PI: 4.6829

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG048460.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	43	90	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ + g+ R++k+c++rw ++l TRIDC3AG048460.1 43 KGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHL 90 79******************************************9986 PP
2	Myb_DNA-binding	52	1.6e-16	96	139	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+++++ ++G++ W++ a++++ gRt++++k++w++ TRIDC3AG048460.1 96 KGAFTPEEERLIIQLHSKMGNK-WARMAAHLP-GRTDNEIKNYWNT 139 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MYRVKSESDC EMMHQEDQMD SPVGDDGSSG GSPHRGGGPP LKKGPWTSAE DAILVDYVKK 60 HGEGNWNAVQ KNTGLFRCGK SCRLRWANHL RPNLKKGAFT PEEERLIIQL HSKMGNKWAR 120 MAAHLPGRTD NEIKNYWNTR IKRCQRAGLP IYPASVCNQS SNEDQQGSSD FNCGENLSSD 180 LLNGNGLYLP DFTCDNFIAN SEALSYAPQL SAVSISSLLG QSFASKNCGF MDQVNQAGML 240 KQSDPLLPGL SDTINGALSS VDQFSNDSEN LKKALGFDYL HEANSSSKMI APFGGALTGS 300 HAFLNGTFST SRTINGPLKM ELPSLQDTES DPNSWLKYTV APAMQPTELV DPYLQSPTAT 360 PSVKSECVSP RNSGLLEELL HEAQGLKSGK NQQLSVRSSS SSVSTPCDTT VVSPEFDICQ 420 DYWEEPLNEY APFSGNSLTG STAPVSAAPP DVFQLSKISP AQSPSLGSGE QAMEPAYEPG 480 AGDTSSHPEN FRPDALFSGN TTDSSVFNNA IAMLLGNDMN TDCKPVFGDG IVFDTSPWSN 540 MPHACQMSEE FK

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MYRVKSESDC EMMHQEDQMD SPVGDDGSSG GSPHRGGGPP LKKGPWTSAE DAILVDYVKK  60
HGEGNWNAVQ KNTGLFRCGK SCRLRWANHL RPNLKKGAFT PEEERLIIQL HSKMGNKWAR  120
MAAHLPGRTD NEIKNYWNTR IKRCQRAGLP IYPASVCNQS SNEDQQGSSD FNCGENLSSD  180
LLNGNGLYLP DFTCDNFIAN SEALSYAPQL SAVSISSLLG QSFASKNCGF MDQVNQAGML  240
KQSDPLLPGL SDTINGALSS VDQFSNDSEN LKKALGFDYL HEANSSSKMI APFGGALTGS  300
HAFLNGTFST SRTINGPLKM ELPSLQDTES DPNSWLKYTV APAMQPTELV DPYLQSPTAT  360
PSVKSECVSP RNSGLLEELL HEAQGLKSGK NQQLSVRSSS SSVSTPCDTT VVSPEFDICQ  420
DYWEEPLNEY APFSGNSLTG STAPVSAAPP DVFQLSKISP AQSPSLGSGE QAMEPAYEPG  480
AGDTSSHPEN FRPDALFSGN TTDSSVFNNA IAMLLGNDMN TDCKPVFGDG IVFDTSPWSN  540
MPHACQMSEE FK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	5e-81	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG048460.1