PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG047350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 399aa    MW: 47256.7 Da    PI: 6.9142
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG047350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1798.6e-2525119191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrk + +  + n++i+ r+fvCs+eg ree++ k   ++++r++r+ t +gCkak+++ + + +g w v+++  eHnH+l
  TRIDC3AG047350.1  25 EFYNKYALEKGFSVRKGYVEWDEANEKIILRKFVCSREGCREEKHMKrkrEDRKRKPRNITCVGCKAKFVIARVTkTGWWFVKDFIDEHNHPL 117
                       6*****************************************999887778889999**************999989***************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC3AG047350.1 118 AP 119
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
VSAECLDEYV NIVSRMFHSG DEGFEFYNKY ALEKGFSVRK GYVEWDEANE KIILRKFVCS  60
REGCREEKHM KRKREDRKRK PRNITCVGCK AKFVIARVTK TGWWFVKDFI DEHNHPLAPR  120
DLACFLRSHR RISDEQKANI IEMESVGIQK HKIMDVLCMH YDGYDQVGCT TRDIYNFCHR  180
YKQETVAAGD AQTVIRHMMA RQERDPDYFF KYLVDKDGHL KGLVWYNTQS RLDYEAFSDV  240
VVFDSTYRTN KYNLPFVPFV GLNHHRNTVI FGCGIISHET NEAYEWMLWT FSEAMAQKHP  300
ISVITDGDLA MQRAIRVVWP DSYHRLCVWH IQQNIVRHLH DDEVREEFRS FIYDSSCIEE  360
HERKWIEFLQ RNEVTSEEVL VCSIPGGALF LRIEQQSGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17380KREDRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-64FAR1 family protein