PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG046810.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 683aa MW: 74988.3 Da PI: 6.8613 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.9 | 1.3e-16 | 44 | 98 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+ +++t++q+++Le +F + +p++++r +++++gLt +qVk+WFqN+R+ +k TRIDC3AG046810.2 44 RRLQRLTPQQTQVLEGFFGICAHPDENQRMGMSESTGLTMQQVKFWFQNKRTHMK 98 666899**********************************************998 PP | |||||||
2 | START | 93.4 | 4.5e-30 | 197 | 412 | 1 | 203 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S...... CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla...... 77 ela++a+ e+v +a+a+ p+W+ ++ + +n++ + q+f + + +ea ra +v m++ + v ++d+ +++ ++ TRIDC3AG046810.2 197 ELAQSAMHEFVVLAEAGGPLWMPVPggsfDVLNKMAYAQTFGARSSanvilgFMTEATRADDMVMMDAKQIVDYIMDSE-CYTSFCPglltsa 288 57999************************************66555899***9****************9999999999.9999999999966 PP .EEEEEEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS START 78 .kaetlevissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165 ++++ +s+ ga +l + e++++splvp R+ +fvR++r ++ g+ +ivdvS+d+ + v++++ pSg l++++ s+vt TRIDC3AG046810.2 289 nTTKIYKWPTSAgynGAMHLVTVETVFPSPLVPsRKCTFVRCCRDMQNGTVIIVDVSLDNGDGT------VKCHKMPSGVLVRSLNSDASQVT 375 6666667777769**********************************************99984......79********************* PP EEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXX CS START 166 wvehvdlkgrlphwllrslvksglaegaktwvatlqrq 203 ++ehv +++ h+l+r+ + sgl++ga++wv+ rq TRIDC3AG046810.2 376 VIEHVQVNDTGLHELYRPSL-SGLMFGARRWVSSIVRQ 412 ******************98.699********876665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 683 aa Download sequence |
VIFCHFECGM PQPQQDRPAR DNDLDISQGN SDGQDGAEGS QPKRRLQRLT PQQTQVLEGF 60 FGICAHPDEN QRMGMSESTG LTMQQVKFWF QNKRTHMKHV TGKEETYRMK AQNEMLREEN 120 KRLASAAKTS FCPSCVALPG LSPSGEVQRL RQENEQLKQQ LSQLRAEAHP SSSRPFQLDP 180 SMENITGREN DMDAIAELAQ SAMHEFVVLA EAGGPLWMPV PGGSFDVLNK MAYAQTFGAR 240 SSANVILGFM TEATRADDMV MMDAKQIVDY IMDSECYTSF CPGLLTSANT TKIYKWPTSA 300 GYNGAMHLVT VETVFPSPLV PSRKCTFVRC CRDMQNGTVI IVDVSLDNGD GTVKCHKMPS 360 GVLVRSLNSD ASQVTVIEHV QVNDTGLHEL YRPSLSGLMF GARRWVSSIV RQSARMRDLF 420 VVSKSASNGN TNGRKTLMKI ADGLLAGYAS GIAAVPGGGW TILRGAGTED DIRISYRRNN 480 DDSNTAIVSV CASFHLPVPH RVTFDLLKNN LLRPKWDVLV NGNSVREEVA VCKGVGGGID 540 DVVSILHLKD PPTGENRDNI MILQNSSYDV SGAFMVYCPV NIQLMNEIMS PSDTAESNKV 600 SLYPTGFYLL PVEDTALGLG EDGATLVTVG FQIMLKLARG TGLYPRSAST AVGLMTENIA 660 TIKKTLTSSH PIFYRRQPPN NFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04890.1 | 1e-103 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG046810.2 |